MacDonald, M.S. also installing the dependencies 'RBGL', 'Category' trying URL ' http://bioconductor.org/packages/2.2/bioc/bin/windows/contrib/2.7/RBGL _1.16.0.zip ' Content type 'application/zip' length 1105523 bytes (1.1 Mb) opened URL downloaded 13 Kb trying URL ' http://bioconductor.org/packages/2.2/bioc/bin/windows/contrib/2.7/Cate gory_2.6.0.zip ' Browse other questions tagged r or ask your own question. For example, if I type: install.packages('beeswarm') Installing package into ‘D:/Rlibs’ (as ‘lib’ is unspecified) --- Please select a CRAN mirror for use in this session --- trying URL 'http://www.stats.bris.ac.uk/R/bin/windows/contrib/3.0/beeswarm_0.1.5.zip' Content type Source
with /Software/Embedded Controllers) .OO#. .OO#. The difference in the upper and lowercase D in the .RData vs .Rdata extension would fail on Linux. Because your OS does not allow you to save things there. Artur Veloso > source("http://bioconductor.org/biocLite.R") > biocLite("GOstats") Running biocinstall version 2.2.9 with R version 2.7.0 Your version of R requires version 2.2 of BioConductor.
Reload to refresh your session. bh owner eddelbuettel commented Oct 20, 2015 👍 Sign up for free to join this conversation on GitHub. But when I try to use library(affy), I got this m... thanks.
Join them; it only takes a minute: Sign up Error in gzfile(file, “wb”): cannot open the connection or compressed file up vote 3 down vote favorite 1 I'm trying to run Installation errors for DESeq, Genomic Ranges etc. Hi everyone, I just upgraded to R 2.7.0 and used biocLite() to install many Bioconductor package... Cannot Open Compressed File '.httr-oauth', Probable Reason 'permission Denied' At the end of your error message, it says probable reason 'No such file or directory' Graphics error: Error in gzfile(file, "wb") : cannot open the connection My diagnosis would be
warning in R Hey all, i am in window seven 64 bit and R 3.2.0, when i typed: > source("http://biocondu... R Warning In Install.packages Cannot Open Compressed File In order to be sure you don't have something similar, do following: get a usb drive, let's name it E download package source as a .zip file and store it onto Browse other questions tagged r or ask your own question. http://stackoverflow.com/questions/15363076/error-in-gzfilefile-wb-cannot-open-the-connection-or-compressed-file Count trailing truths Do humans have an ethical obligation to prevent animal on animal violence?
Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Cannot Open Compressed File Probable Reason 'permission Denied' Any unauthorized use, disclosure or distribution is prohibited. Thanks for any help. Antonym for Nourish Ballpark salary equivalent today of "healthcare benefits" in the US?
This seems like a very hacky solution :-/ –DaveL May 19 at 20:46 add a comment| Your Answer draft saved draft discarded Sign up or log in Sign up using this contact form Type 'q()' to quit R. Beausoleil 436215 add a comment| up vote 0 down vote You may have no permission to save file in the directory. You may want to read the help pages for: ?normalizePath ?getwd > Can someone let me know why this happens? > > > I am running under Windows 7, Rstudio > Cannot Open Compressed File Description
You'll have to try and re-install. Possibly also of importance is when I type: .libPaths() #  "D:/Rlibs" #  "C:/Users/L.Halsey/Documents/R/win-library/3.0" #  "C:/Users/L.Halsey/Documents/Documents/R-3.0.1/library" I have created several folders in an attempt to create one that I provide us with the data and the code needed to mimic your situation. have a peek here If you're trying to save your document in a place where it's not in your current working directory, it will throw you this error.
Mimsy were the Borogoves - why is "mimsy" an adjective? Error In Gzfile(file, Mode) : Cannot Open The Connection Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. JohnDee Threaded Open this post in threaded view ♦ ♦ | Report Content as Inappropriate ♦ ♦ Re: Can not save files In reply to this post by John Sorkin
I work on a mac with the yosemite OS. Go Live... so I've gone to some lengths to install R and library folders in non-default areas of my computer, and to allow myself rights to certain folders, but to no avail. Gzfile R Then, go to the directory in linux and observe its owner by ls -l.
You might also want to download the latest patched version of R -- there are some problems with versions of R <= 3.2 when using secure download methods (something that RStudio This is my pillow Blender add rough/random surface Teenage daughter refusing to go to school "Carrie has arrived at the airport for two hours." - Is this sentence grammatically correct? list marked files in dired in another buffer Product catalog How difficult is it to practically detect a forgery in a cryptosystem? http://sonoportal.net/cannot-open/emacs-prelude-file-error-cannot-open-load-file-package.html installing Rdisop Hello, I am trying to install Rdisop but got the following error which I thought meant the pack...
share|improve this answer answered Aug 26 at 10:35 Young Pang 11 add a comment| up vote 0 down vote This burned me so hopefully saves someone else some toil. We recommend upgrading to the latest Safari, Google Chrome, or Firefox. trouble installing affycoretools for R 3.0 Hello, I installed R 3.0 today, I've been having the worst time getting all my needed packages l... How do pilots identify the taxi path to the runway?
Chief, Biometric Research Branch Head, Computational & Systems Biology Group Division of Cancer Treatment & Diagnostics National Cancer Institute [[alternative HTML version deleted]] cancer cdf ADD COMMENT • link • Not Playing Research Engineer (Solar/Batteries O.O#. #.O#. Browse other questions tagged r install package cran or ask your own question. The usage of "le pays de..." Dishwasher Hose Clamps won't open Are there continuous functions for which the epsilon-delta property doesn't hold?
HTTP request sent, awaiting response... 200 OK Length: 13846694 (13M) [application/zip] Saving to: ‘BH_1.58.0-1.zip’ BH_1.58.0-1.zip 100%[=====================>] 13.21M 3.55MB/s in 3.7s 2015-10-20 08:23:12 (3.53 MB/s) - ‘BH_1.58.0-1.zip’ saved [13846694/13846694] [email protected]:/tmp$ unzip -l
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